Center-Authored Papers

Filters: Author is Zhao, Lue Ping  [Clear All Filters]
2008
Yang Y, Li SS, Chien JW, Andriesen J, Zhao LP.  2008.  A systematic search for SNPs/haplotypes associated with disease phenotypes using a haplotype-based stepwise procedure.. BMC genetics. 9:90. Abstract
Chen C, Méndez E, Houck J, Fan W, Lohavanichbutr P, Doody D, Yueh B, Futran ND, Upton M, Farwell GD et al..  2008.  Gene expression profiling identifies genes predictive of oral squamous cell carcinoma.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 17(8):2152-62. Abstract
Chen C, Sakoda LC, Doherty JA, Loomis MM, Fish S, Ray RM, Lin MG, Fan W, Zhao LP, Gao D et al..  2008.  Genetic variation in CYP19A1 and risk of breast cancer and fibrocystic breast conditions among women in Shanghai, China.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 17(12):3457-66. Abstract
Bochud P-Y, Hawn TR, Siddiqui RM, Saunderson P, Britton S, Abraham I, Argaw AT, Janer M, Zhao LP, Kaplan G et al..  2008.  Toll-like receptor 2 (TLR2) polymorphisms are associated with reversal reaction in leprosy.. The Journal of infectious diseases. 197(2):253-61. Abstract
Xu C, Houck JR, Fan W, Wang P, Chen Y, Upton M, Futran ND, Schwartz SM, Zhao LP, Chen C et al..  2008.  Simultaneous isolation of DNA and RNA from the same cell population obtained by laser capture microdissection for genome and transcriptome profiling.. The Journal of molecular diagnostics : JMD. 10(2):129-34. Abstract
Madeleine MM, Johnson LG, Smith AG, Hansen JA, Nisperos BB, Li S, Zhao LP, Daling JR, Schwartz SM, Galloway DA.  2008.  Comprehensive analysis of HLA-A, HLA-B, HLA-C, HLA-DRB1, and HLA-DQB1 loci and squamous cell cervical cancer risk.. Cancer research. 68(9):3532-9. Abstract
Bochud P-Y, Chien JW, Marr KA, Leisenring WM, Upton A, Janer M, Rodrigues SD, Li S, Hansen JA, Zhao LP et al..  2008.  Toll-like receptor 4 polymorphisms and aspergillosis in stem-cell transplantation.. The New England journal of medicine. 359(17):1766-77. Abstract
2009
McCarroll SA, Bradner JE, Turpeinen H, Volin L, Martin PJ, Chilewski SD, Antin JH, Lee SJ, Ruutu T, Storer BE et al..  2009.  Donor-recipient mismatch for common gene deletion polymorphisms in graft-versus-host disease.. Nature genetics. 41(12):1341-4. Abstract
Maley SN, Schwartz SM, Johnson LG, Malkki M, Du Q, Daling JR, Li SS, Zhao LP, Petersdorf EW, Madeleine MM.  2009.  Genetic variation in CXCL12 and risk of cervical carcinoma: a population-based case-control study.. International journal of immunogenetics. 36(6):367-75. Abstract
Lohavanichbutr P, Houck J, Fan W, Yueh B, Méndez E, Futran N, Doody DR, Upton MP, Farwell GD, Schwartz SM et al..  2009.  Genomewide gene expression profiles of HPV-positive and HPV-negative oropharyngeal cancer: potential implications for treatment choices.. Archives of otolaryngology--head & neck surgery. 135(2):180-8. Abstract
Méndez E, Houck JR, Doody DR, Fan W, Lohavanichbutr P, Rue TC, Yueh B, Futran ND, Upton MP, Farwell GD et al..  2009.  A genetic expression profile associated with oral cancer identifies a group of patients at high risk of poor survival.. Clinical cancer research : an official journal of the American Association for Cancer Research. 15(4):1353-61. Abstract
Chien JW, Zhao LP, Storer BE, Martin PJ, Boeckh MJ, Warren EH, Hansen JA.  2009.  Improving hematopoietic cell transplant outcomes in a new era of genomic research.. Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation. 15(1 Suppl):42-5.
Tseng L-H, Storer BE, Petersdorf EW, Lin M-T, Chien JW, Grogan BM, Malkki M, Chen P-J, Zhao LP, Martin PJ et al..  2009.  IL10 and IL10 receptor gene variation and outcomes after unrelated and related hematopoietic cell transplantation.. Transplantation. 87(5):704-10. Abstract
2010
Xu C, Liu Y, Wang P, Fan W, Rue TC, Upton MP, Houck JR, Lohavanichbutr P, Doody DR, Futran ND et al..  2010.  Integrative analysis of DNA copy number and gene expression in metastatic oral squamous cell carcinoma identifies genes associated with poor survival.. Molecular cancer. 9:143. Abstract
Bergemann TL, Zhao LP.  2010.  Signal quality measurements for cDNA microarray data.. IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM. 7(2):299-308. Abstract
Scholes D, Hawn TR, Roberts PL, Li SS, Stapleton AE, Zhao LP, Stamm WE, Hooton TM.  2010.  Family history and risk of recurrent cystitis and pyelonephritis in women.. The Journal of urology. 184(2):564-9. Abstract
Hansen JA, Chien JW, Warren EH, Zhao LP, Martin PJ.  2010.  Defining genetic risk for graft-versus-host disease and mortality following allogeneic hematopoietic stem cell transplantation.. Current opinion in hematology. 17(6):483-92. Abstract
2011
Zhang XC, Li SS, Wang H, Hansen JA, Zhao LP.  2011.  Empirical evaluations of analytical issues arising from predicting HLA alleles using multiple SNPs.. BMC genetics. 12:39. Abstract
Chen YQ, Zhang XC, Zhao LP.  2011.  Estimating a Scale-change Effect for Time-varying Phenotypes in Genome-wide Association Studies . Journal of Applied Statistical Science. 18(4):31-46.
Méndez E, Lohavanichbutr P, Fan W, Houck JR, Rue TC, Doody DR, Futran ND, Upton MP, Yueh B, Zhao LP et al..  2011.  Can a metastatic gene expression profile outperform tumor size as a predictor of occult lymph node metastasis in oral cancer patients? Clinical cancer research : an official journal of the American Association for Cancer Research. 17(8):2466-73. Abstract
Pogosova-Agadjanyan EL, Fan W, Georges GE, Schwartz JL, Kepler CM, Lee H, Suchanek AL, Cronk MR, Brumbaugh A, Engel JH et al..  2011.  Identification of radiation-induced expression changes in nonimmortalized human T cells.. Radiation research. 175(2):172-84. Abstract
Li SS, Wang H, Smith A, Zhang B, Zhang XC, Schoch G, Geraghty DE, Hansen JA, Zhao LP.  2011.  Predicting multiallelic genes using unphased and flanking single nucleotide polymorphisms.. Genetic epidemiology. 35(2):85-92. Abstract
Li L, Li M, Sun C, Francisco L, Chakraborty S, Sabado M, McDonald T, Gyorffy J, Chang K, Wang S et al..  2011.  Altered hematopoietic cell gene expression precedes development of therapy-related myelodysplasia/acute myeloid leukemia and identifies patients at risk.. Cancer cell. 20(5):591-605. Abstract
Doherty JA, Weiss NS, Fish S, Fan W, Loomis MM, Sakoda LC, Rossing MA, Zhao LP, Chen C.  2011.  Polymorphisms in Nucleotide Excision Repair Genes and Endometrial Cancer Risk.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 20(9):1873-1882. Abstract
2012
Serrano NA, Xu C, Liu Y, Wang P, Fan W, Upton MP, Houck JR, Lohavanichbutr P, Kao M, Zhao LP et al..  2012.  Integrative Analysis in Oral Squamous Cell Carcinoma Reveals DNA Copy Number-Associated miRNAs Dysregulating Target Genes.. Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery. 147(3):501-8. Abstract