Center-Authored Papers

Filters: Author is Paulovich, Amanda G  [Clear All Filters]
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Young Adult
Ivey RG, Moore HD, Voytovich UJ, Thienes CP, Lorentzen TD, Pogosova-Agadjanyan EL, Frayo S, Izaguirre VK, Lundberg SJ, Hedin L et al..  2011.  Blood-based detection of radiation exposure in humans based on novel phospho-Smc1 ELISA.. Radiation research. 175(3):266-81. Abstract
Whole-Body Irradiation
Ivey RG, Moore HD, Voytovich UJ, Thienes CP, Lorentzen TD, Pogosova-Agadjanyan EL, Frayo S, Izaguirre VK, Lundberg SJ, Hedin L et al..  2011.  Blood-based detection of radiation exposure in humans based on novel phospho-Smc1 ELISA.. Radiation research. 175(3):266-81. Abstract
Tumor Suppressor Proteins
Ivey RG, Moore HD, Voytovich UJ, Thienes CP, Lorentzen TD, Pogosova-Agadjanyan EL, Frayo S, Izaguirre VK, Lundberg SJ, Hedin L et al..  2011.  Blood-based detection of radiation exposure in humans based on novel phospho-Smc1 ELISA.. Radiation research. 175(3):266-81. Abstract
Tumor Markers, Biological
Wang P, Whiteaker JR, Paulovich AG.  2009.  The evolving role of mass spectrometry in cancer biomarker discovery.. Cancer biology & therapy. 8(12):1083-94. Abstract
Treatment Outcome
Piening BD, Wang P, Subramanian A, Paulovich AG.  2009.  A radiation-derived gene expression signature predicts clinical outcome for breast cancer patients.. Radiation research. 171(2):141-54. Abstract
Transfection
Furuya M, Kirschbaum SB, Paulovich AG, Pauli BU, Zhang H, Alexander JS, Farr AG, Ruddell A.  2010.  Lymphatic endothelial murine chloride channel calcium-activated 1 is a ligand for leukocyte LFA-1 and Mac-1.. Journal of immunology (Baltimore, Md. : 1950). 185(10):5769-77. Abstract
Transcription, Genetic
Schoenherr RM, Kelly-Spratt KS, Lin C, Whiteaker JR, Liu T, Holzman T, Coleman I, Feng L-C, Lorentzen TD, Krasnoselsky AL et al..  2011.  Proteome and transcriptome profiles of a Her2/Neu-driven mouse model of breast cancer.. Proteomics. Clinical applications. 5(3-4):179-88. Abstract
Time Factors
Ivey RG, Moore HD, Voytovich UJ, Thienes CP, Lorentzen TD, Pogosova-Agadjanyan EL, Frayo S, Izaguirre VK, Lundberg SJ, Hedin L et al..  2011.  Blood-based detection of radiation exposure in humans based on novel phospho-Smc1 ELISA.. Radiation research. 175(3):266-81. Abstract
Technology Assessment, Biomedical
Addona TA, Abbatiello SE, Schilling B, Skates SJ, Mani DR, Bunk DM, Spiegelman CH, Zimmerman LJ, Ham A-JL, Keshishian H et al..  2009.  Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma.. Nature biotechnology. 27(7):633-41. Abstract
Tandem Mass Spectrometry
Kuhn E, Whiteaker JR, Mani DR, Jackson AM, Zhao L, Pope ME, Smith D, Rivera KD, Anderson LN, Skates SJ et al..  2012.  Interlaboratory evaluation of automated, multiplexed peptide immunoaffinity enrichment coupled to multiple reaction monitoring mass spectrometry for quantifying proteins in plasma.. Molecular & cellular proteomics : MCP. 11(6):M111.013854. Abstract
Rudnick PA, Clauser KR, Kilpatrick LE, Tchekhovskoi DV, Neta P, Blonder N, Billheimer DD, Blackman RK, Bunk DM, Cardasis HL et al..  2010.  Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses.. Molecular & cellular proteomics : MCP. 9(2):225-41. Abstract
Tabb DL, Vega-Montoto L, Rudnick PA, Variyath AM, Ham A-JL, Bunk DM, Kilpatrick LE, Billheimer DD, Blackman RK, Cardasis HL et al..  2010.  Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry.. Journal of proteome research. 9(2):761-76. Abstract
Schoenherr RM, Kelly-Spratt KS, Lin C, Whiteaker JR, Liu T, Holzman T, Coleman I, Feng L-C, Lorentzen TD, Krasnoselsky AL et al..  2011.  Proteome and transcriptome profiles of a Her2/Neu-driven mouse model of breast cancer.. Proteomics. Clinical applications. 5(3-4):179-88. Abstract
Suppression, Genetic
Murakami-Sekimata A, Huang D, Piening BD, Bangur C, Paulovich AG.  2010.  The Saccharomyces cerevisiae RAD9, RAD17 and RAD24 genes are required for suppression of mutagenic post-replicative repair during chronic DNA damage.. DNA repair. 9(7):824-34. Abstract
Software
Maclean B, Tomazela DM, Abbatiello SE, Zhang S, Whiteaker JR, Paulovich AG, Carr SA, MacCoss MJ.  2010.  Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry.. Analytical chemistry. 82(24):10116-24. Abstract
Rudnick PA, Clauser KR, Kilpatrick LE, Tchekhovskoi DV, Neta P, Blonder N, Billheimer DD, Blackman RK, Bunk DM, Cardasis HL et al..  2010.  Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses.. Molecular & cellular proteomics : MCP. 9(2):225-41. Abstract
Shared Resources
Furuya M, Kirschbaum SB, Paulovich AG, Pauli BU, Zhang H, Alexander JS, Farr AG, Ruddell A.  2010.  Lymphatic endothelial murine chloride channel calcium-activated 1 is a ligand for leukocyte LFA-1 and Mac-1.. Journal of immunology (Baltimore, Md. : 1950). 185(10):5769-77. Abstract
Schoenherr RM, Kelly-Spratt KS, Lin C, Whiteaker JR, Liu T, Holzman T, Coleman I, Feng L-C, Lorentzen TD, Krasnoselsky AL et al..  2011.  Proteome and transcriptome profiles of a Her2/Neu-driven mouse model of breast cancer.. Proteomics. Clinical applications. 5(3-4):179-88. Abstract
Whiteaker JR, Lin C, Kennedy J, Hou L, Trute M, Sokal I, Yan P, Schoenherr RM, Zhao L, Voytovich UJ et al..  2011.  A targeted proteomics-based pipeline for verification of biomarkers in plasma.. Nature biotechnology. 29(7):625-34. Abstract
Ivey RG, Moore HD, Voytovich UJ, Thienes CP, Lorentzen TD, Pogosova-Agadjanyan EL, Frayo S, Izaguirre VK, Lundberg SJ, Hedin L et al..  2011.  Blood-based detection of radiation exposure in humans based on novel phospho-Smc1 ELISA.. Radiation research. 175(3):266-81. Abstract
Murakami-Sekimata A, Huang D, Piening BD, Bangur C, Paulovich AG.  2010.  The Saccharomyces cerevisiae RAD9, RAD17 and RAD24 genes are required for suppression of mutagenic post-replicative repair during chronic DNA damage.. DNA repair. 9(7):824-34. Abstract
September 2011
Zhao L, Whiteaker JR, Pope ME, Kuhn E, Jackson A, Anderson LN, Pearson TW, Carr SA, Paulovich AG.  2011.  Quantification of proteins using Peptide immunoaffinity enrichment coupled with mass spectrometry.. Journal of visualized experiments : JoVE. (53) Abstract
Sensitivity and Specificity
Addona TA, Abbatiello SE, Schilling B, Skates SJ, Mani DR, Bunk DM, Spiegelman CH, Zimmerman LJ, Ham A-JL, Keshishian H et al..  2009.  Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma.. Nature biotechnology. 27(7):633-41. Abstract
Whiteaker JR, Zhao L, Abbatiello SE, Burgess M, Kuhn E, Lin C, Pope ME, Razavi M, Anderson LN, Pearson TW et al..  2011.  Evaluation of large scale quantitative proteomic assay development using peptide affinity-based mass spectrometry.. Molecular & cellular proteomics : MCP. 10(4):M110.005645. Abstract
Scientific Imaging Core Facility
Huang D, Piening BD, Paulovich AG.  2013.  The preference for error-free or error-prone postreplication repair in Saccharomyces cerevisiae exposed to low-dose methyl methanesulfonate is cell cycle dependent.. Molecular and cellular biology. 33(8):1515-27. Abstract