Center-Authored Papers

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Borensztein M, Monnier P, Court F, Louault Y, Ripoche M-A, Tiret L, Yao Z, Tapscott SJ, Forné T, Montarras D et al..  2013.  Myod and H19-Igf2 locus interactions are required for diaphragm formation in the mouse.. Development (Cambridge, England). 140(6):1231-9. Abstract
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Cao Y, Yao Z, Sarkar D, Lawrence M, Sanchez GJ, Parker MH, MacQuarrie KL, Davison J, Morgan MT, Ruzzo WL et al..  2010.  Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.. Developmental cell. 18(4):662-74. Abstract
Conerly ML, Yao Z, Zhong JW, Groudine M, Tapscott SJ.  2016.  Distinct Activities of Myf5 and MyoD Indicate Separate Roles in Skeletal Muscle Lineage Specification and Differentiation.. Developmental cell. 36(4):375-85. Abstract
Conerly ML, MacQuarrie KL, Fong AP, Yao Z, Tapscott SJ.  2011.  Polycomb-mediated repression during terminal differentiation: what don't you want to be when you grow up? Genes & development. 25(10):997-1003. Abstract
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Diede SJ, Yao Z, Keyes CC, Tyler AE, Dey J, Hackett CS, Elsaesser K, Kemp CJ, Neiman PE, Weiss WA et al..  2013.  Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer.. Epigenetics : official journal of the DNA Methylation Society. 8(12):1254-60. Abstract
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Fong AP, Yao Z, Zhong JW, Johnson NM, Farr GH, Maves L, Tapscott SJ.  2015.  Conversion of MyoD to a Neurogenic Factor: Binding Site Specificity Determines Lineage.. Cell reports. 10(12):1937-46. Abstract
Fong AP, Yao Z, Zhong JW, Cao Y, Ruzzo WL, Gentleman RC, Tapscott SJ.  2012.  Genetic and epigenetic determinants of neurogenesis and myogenesis.. Developmental cell. 22(4):721-35. Abstract
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Geng LN, Yao Z, Snider L, Fong AP, Cech JN, Young JM, van der Maarel SM, Ruzzo WL, Gentleman RC, Tawil R et al..  2012.  DUX4 Activates Germline Genes, Retroelements, and Immune Mediators: Implications for Facioscapulohumeral Dystrophy.. Developmental cell. 22(1):38-51. Abstract
Gianakopoulos PJ, Mehta V, Voronova A, Cao Y, Yao Z, Coutu J, Wang X, Waddington MS, Tapscott SJ, Skerjanc IS.  2011.  MyoD directly up-regulates premyogenic mesoderm factors during induction of skeletal myogenesis in stem cells.. The Journal of biological chemistry. 286(4):2517-25. Abstract
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Krom YD, Thijssen PE, Young JM, den Hamer B, Balog J, Yao Z, Maves L, Snider L, Knopp P, Zammit PS et al..  2013.  Intrinsic epigenetic regulation of the D4Z4 macrosatellite repeat in a transgenic mouse model for FSHD.. PLoS genetics. 9(4):e1003415. Abstract
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Lim J-W, Snider L, Yao Z, Tawil R, van der Maarel SM, Rigo F, Bennett FC, Filippova GN, Tapscott SJ.  2015.  DICER/AGO-dependent Epigenetic Silencing of D4Z4 Repeats Enhanced by Exogenous siRNA Suggests Mechanisms and Therapies for FSHD.. Human molecular genetics. Abstract
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MacQuarrie KL, Yao Z, Young JM, Cao Y, Tapscott SJ.  2012.  miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells.. Skeletal muscle. 2(1):7. Abstract
MacQuarrie KL, Yao Z, Fong AP, Tapscott SJ.  2013.  Genome-wide binding of the basic helix-loop-helix myogenic inhibitor musculin has substantial overlap with MyoD: implications for buffering activity.. Skeletal muscle. 3(1):26. Abstract
MacQuarrie KL, Yao Z, Fong AP, Diede SJ, Rudzinski ER, Hawkins DS, Tapscott SJ.  2013.  Comparison of Genome-Wide Binding of MyoD in Normal Human Myogenic Cells and Rhabdomyosarcomas Identifies Regional and Local Suppression of Promyogenic Transcription Factors.. Molecular and cellular biology. 33(4):773-84. Abstract
Mahoney SE, Yao Z, Keyes CC, Tapscott SJ, Diede SJ.  2012.  Genome-wide DNA methylation studies suggest distinct DNA methylation patterns in pediatric embryonal and alveolar rhabdomyosarcomas.. Epigenetics : official journal of the DNA Methylation Society. 7(4) Abstract
Mason AG, Slieker RC, Balog J, Lemmers RJLF, Wong C-J, Yao Z, Lim J-W, Filippova GN, Ne E, Tawil R et al..  2017.  SMCHD1 regulates a limited set of gene clusters on autosomal chromosomes.. Skeletal muscle. 7:12. Abstract
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Palii CG, Perez-Iratxeta C, Yao Z, Cao Y, Dai F, Davison J, Atkins H, Allan D, Dilworth JF, Gentleman R et al..  2011.  Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages.. The EMBO journal. 30(3):494-509. Abstract
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Sebastian S, Faralli H, Yao Z, Rakopoulos P, Palii C, Cao Y, Singh K, Liu Q-C, Chu A, Aziz A et al..  2013.  Tissue-specific splicing of a ubiquitously expressed transcription factor is essential for muscle differentiation.. Genes & development. 27(11):1247-59. Abstract
Seemann SE, Mirza AH, Hansen C, Bang-Berthelsen CH, Garde C, Christensen-Dalsgaard M, Torarinsson E, Yao Z, Workman CT, Pociot F et al..  2017.  The identification and functional annotation of RNA structures conserved in vertebrates.. Genome research. Abstract
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Thijssen PE, Balog J, Yao Z, Pham TP, Tawil R, Tapscott SJ, van der Maarel SM.  2014.  DUX4 promotes transcription of FRG2 by directly activating its promoter in facioscapulohumeral muscular dystrophy.. Skeletal muscle. 4:19. Abstract
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Yao Z, MacQuarrie KL, Fong AP, Tapscott SJ, Ruzzo WL, Gentleman RC.  2013.  Discriminative motif analysis of high-throughput dataset.. Bioinformatics (Oxford, England). Abstract
Yao Z, Farr GH, Tapscott SJ, Maves L.  2013.  Pbx and Prdm1a transcription factors differentially regulate subsets of the fast skeletal muscle program in zebrafish.. Biology open. 2(6):546-55. Abstract
Yao Z, Fong AP, Cao Y, Ruzzo WL, Gentleman RC, Tapscott SJ.  2013.  Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites.. Skeletal muscle. 3(1):8. Abstract
Yao Z, Snider L, Balog J, Lemmers RJLF, van der Maarel SM, Tawil R, Tapscott SJ.  2014.  DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle.. Human molecular genetics. Abstract
Young JM, Whiddon JL, Yao Z, Kasinathan B, Snider L, Geng LN, Balog J, Tawil R, van der Maarel SM, Tapscott SJ.  2013.  DUX4 binding to retroelements creates promoters that are active in FSHD muscle and testis.. PLoS genetics. 9(11):e1003947. Abstract