Center-Authored Papers

Filters: Author is Stamatoyannopoulos, John A  [Clear All Filters]
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Chaisson MJP, Huddleston J, Dennis MY, Sudmant PH, Malig M, Hormozdiari F, Antonacci F, Surti U, Sandstrom R, Boitano M et al..  2015.  Resolving the complexity of the human genome using single-molecule sequencing.. Nature. 517(7536):608-11. Abstract
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Deyle DR, Hansen SR, Cornea AM, Li LB, Burt AA, Alexander IE, Sandstrom RS, Stamatoyannopoulos JA, Wei C-L, Russell DW.  2014.  A genome-wide map of adeno-associated virus-mediated human gene targeting.. Nature structural & molecular biology. 21(11):969-75. Abstract
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Iwata M, Sandstrom RS, Delrow JJ, Stamatoyannopoulos JA, Torok-Storb B.  2014.  Functionally and Phenotypically Distinct Subpopulations of Marrow Stromal Cells Are Fibroblast in Origin and Induce Different Fates in Peripheral Blood Monocytes.. Stem cells and development. 23(7):729-40. Abstract
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Manichaikul A, Wang X-Q, Zhao W, Wojczynski MK, Siebenthall K, Stamatoyannopoulos JA, Saleheen D, Borecki IB, Reilly MP, Rich SS et al..  2016.  Genetic association of long-chain acyl-CoA synthetase 1 variants with fasting glucose, diabetes, and subclinical atherosclerosis.. Journal of lipid research. 57(3):433-42. Abstract
Maurano MT, Humbert R, Rynes E, Thurman RE, Haugen E, Wang H, Reynolds AP, Sandstrom R, Qu H, Brody J et al..  2012.  Systematic localization of common disease-associated variation in regulatory DNA.. Science (New York, N.Y.). 337(6099):1190-5. Abstract
Mouse ENCODE Consortium, Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R et al..  2012.  An encyclopedia of mouse DNA elements (Mouse ENCODE).. Genome biology. 13:418. Abstract
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Neph S, Vierstra J, Stergachis AB, Reynolds AP, Haugen E, Vernot B, Thurman RE, John S, Sandstrom R, Johnson AK et al..  2012.  An expansive human regulatory lexicon encoded in transcription factor footprints.. Nature. 489(7414):83-90. Abstract
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Stergachis AB, Neph S, Reynolds A, Humbert R, Miller B, Paige SL, Vernot B, Cheng JB, Thurman RE, Sandstrom R et al..  2013.  Developmental fate and cellular maturity encoded in human regulatory DNA landscapes.. Cell. 154(4):888-903. Abstract
Stergachis AB, Neph S, Sandstrom R, Haugen E, Reynolds AP, Zhang M, Byron R, Canfield T, Stelhing-Sun S, Lee K et al..  2014.  Conservation of trans-acting circuitry during mammalian regulatory evolution.. Nature. 515(7527):365-70. Abstract
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Thurman RE, Rynes E, Humbert R, Vierstra J, Maurano MT, Haugen E, Sheffield NC, Stergachis AB, Wang H, Vernot B et al..  2012.  The accessible chromatin landscape of the human genome.. Nature. 489(7414):75-82. Abstract
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Vierstra J, Rynes E, Sandstrom R, Zhang M, Canfield T, Hansen SR, Stehling-Sun S, Sabo PJ, Byron R, Humbert R et al..  2014.  Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.. Science (New York, N.Y.). 346(6212):1007-12. Abstract
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Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD et al..  2014.  A comparative encyclopedia of DNA elements in the mouse genome.. Nature. 515(7527):355-64. Abstract
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Zrazhevskiy P, Akilesh S, Tai W, Queitsch K, True LD, Fromm J, Wu D, Nelson P, Stamatoyannopoulos JA, Gao X.  2016.  Cross-Platform DNA Encoding for Single-Cell Imaging of Gene Expression.. Angewandte Chemie (International ed. in English). Abstract