Center-Authored Papers

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Nagana Gowda GA, Raftery D.  2017.  Whole Blood Metabolomics by (1)H NMR Spectroscopy Provides a New Opportunity To Evaluate Coenzymes and Antioxidants.. Analytical chemistry. 89(8):4620-4627. Abstract
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Parent BA, Seaton M, Sood RF, Gu H, Djukovic D, Raftery D, O'Keefe GE.  2016.  Use of Metabolomics to Trend Recovery and Therapy After Injury in Critically Ill Trauma Patients.. JAMA surgery. :e160853. Abstract
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Rabinowitz JS, Robitaille AM, Wang Y, Ray CA, Thummel R, Gu H, Djukovic D, Raftery D, Berndt JD, Moon RT.  2017.  Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish.. Proceedings of the National Academy of Sciences of the United States of America. Abstract
Zhu J, Djukovic D, Deng L, Gu H, Himmati F, Abu Zaid M, Chiorean GE, Raftery D.  2015.  Targeted serum metabolite profiling and sequential metabolite ratio analysis for colorectal cancer progression monitoring.. Analytical and bioanalytical chemistry. Abstract
Barton S, Navarro SL, Buas MF, Schwarz Y, Gu H, Djukovic D, Raftery D, Kratz M, Neuhouser ML, Lampe JW.  2015.  Targeted plasma metabolome response to variations in dietary glycemic load in a randomized, controlled, crossover feeding trial in healthy adults.. Food & function. 6(9):2949-56. Abstract
Sood RF, Gu H, Djukovic D, Deng L, Ga M, Muffley LA, Raftery D, Hocking AM.  2015.  Targeted metabolic profiling of wounds in diabetic and non-diabetic mice.. Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society. Abstract
Baniasadi H, Gowda NGA, Gu H, Zeng A, Zhuang S, Skill N, Maluccio M, Raftery D.  2013.  Targeted metabolic profiling of hepatocellular carcinoma and hepatitis C using LC-MS/MS.. Electrophoresis. 34(19):2910-7. Abstract
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Emwas A-H, Luchinat C, Turano P, Tenori L, Roy R, Salek RM, Ryan D, Merzaban JS, Kaddurah-Daouk R, Zeri AC et al..  2015.  Standardizing the experimental conditions for using urine in NMR-based metabolomic studies with a particular focus on diagnostic studies: a review.. Metabolomics : Official journal of the Metabolomic Society. 11(4):872-894. Abstract
Nagana Gowda GA, Abell L, Lee CF, Tian R, Raftery D.  2016.  Simultaneous Analysis of Major Coenzymes of Cellular Redox Reactions and Energy Using ex Vivo (1)H NMR Spectroscopy.. Analytical chemistry. 88(9):4817-24. Abstract
Heitkemper MM, Han CJ, Jarrett ME, Gu H, Djukovic D, Shulman RJ, Raftery D, Henderson WA, Cain KC.  2015.  Serum Tryptophan Metabolite Levels During Sleep in Patients With and Without Irritable Bowel Syndrome (IBS).. Biological research for nursing. Abstract
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Emwas A-H, Roy R, McKay RT, Ryan D, Brennan L, Tenori L, Luchinat C, Gao X, Zeri AC, Gowda NGA et al..  2016.  Recommendations and Standardization of Biomarker Quantification Using NMR-Based Metabolomics with Particular Focus on Urinary Analysis.. Journal of proteome research. 15(2):360-73. Abstract
Nagana Gowda GA, Raftery D.  2017.  Recent Advances in NMR-Based Metabolomics.. Analytical chemistry. 89(1):490-510.
Chiao YA, Kolwicz SC, Basisty N, Gagnidze A, Zhang J, Gu H, Djukovic D, Beyer RP, Raftery D, MacCoss M et al..  2016.  Rapamycin transiently induces mitochondrial remodeling to reprogram energy metabolism in old hearts.. Aging. Abstract
Gu H, Gowda NGA, Neto FC, Opp MR, Raftery D.  2013.  RAMSY: ratio analysis of mass spectrometry to improve compound identification.. Analytical chemistry. 85(22):10771-9. Abstract
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Gu H, Carroll PA, Du J, Zhu J, Neto FC, Eisenman RN, Raftery D.  2016.  Quantitative Method to Investigate the Balance between Metabolism and Proteome Biomass: Starting from Glycine.. Angewandte Chemie (International ed. in English). 55(50):15646-15650. Abstract
Gowda NGA, Raftery D.  2014.  Quantitating Metabolites in Protein Precipitated Serum Using NMR Spectroscopy.. Analytical chemistry. Abstract
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Miles FL, Navarro SL, Schwarz Y, Gu H, Djukovic D, Randolph TW, Shojaie A, Kratz M, Hullar MAJ, Lampe PD et al..  2017.  Plasma metabolite abundances are associated with urinary enterolactone excretion in healthy participants on controlled diets.. Food & function. Abstract
Navarro SL, Randolph TW, Shireman LM, Raftery D, McCune JS.  2016.  Pharmacometabonomic Prediction of Busulfan Clearance in Hematopoetic Cell Transplant Recipients.. Journal of proteome research. 15(8):2802-11. Abstract
Parent BA, Seaton M, Djukovic D, Gu H, Wheelock B, Raftery D, O'Keefe GE.  2017.  Parenteral and enteral nutrition in surgical critical-care: plasma metabolomics demonstrates divergent effects on nitrogen, fatty-acid, ribonucleotide and oxidative metabolism.. The journal of trauma and acute care surgery. Abstract
Davis RJ, Gönen M, Margineantu DH, Handeli S, Swanger J, Hoellerbauer P, Paddison PJ, Gu H, Raftery D, Grim JE et al..  2018.  Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism.. Proceedings of the National Academy of Sciences of the United States of America. 115(21):5462-5467. Abstract
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Gu H, Du J, Neto FC, Carroll PA, Turner SJ, Chiorean GE, Eisenman RN, Raftery D.  2015.  Metabolomics method to comprehensively analyze amino acids in different domains.. The Analyst. 140(8):2726-34. Abstract
Sperber H, Mathieu J, Wang Y, Ferreccio A, Hesson J, Xu Z, Fischer KA, Devi A, Detraux D, Gu H et al..  2015.  The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition.. Nature cell biology. 17(12):1523-1535. Abstract
Srinivasan S, Morgan MT, Fiedler TL, Djukovic D, Hoffman NG, Raftery D, Marrazzo JM, Fredricks DN.  2015.  Metabolic signatures of bacterial vaginosis.. mBio. 6(2) Abstract
Zhang S, Liu L, Steffen D, Ye T, Raftery D.  2012.  Metabolic profiling of gender: Headspace-SPME/GC–MS and 1H NMR analysis of urine. Metabolomics. 8(2):323-334.
Nagana Gowda GA, Gowda YN, Raftery D.  2015.  Massive glutamine cyclization to pyroglutamic Acid in human serum discovered using NMR spectroscopy.. Analytical chemistry. 87(7):3800-5. Abstract