Center-Authored Papers

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Vaccine and Infectious Disease Division
Slyker JA, Casper C, Tapia K, Richardson B, Bunts L, Huang M-L, Maleche-Obimbo E, Nduati R, John-Stewart G.  2013.  Clinical and Virologic Manifestations of Primary Epstein-Barr Virus (EBV) Infection in Kenyan Infants Born to HIV-Infected Women.. The Journal of infectious diseases. Abstract
Slyker JA, Casper C, Tapia K, Richardson B, Bunts L, Huang M-L, Wamalwa D, Benki-Nugent S, John-Stewart G.  2014.  Accelerated suppression of primary EBV infection in HIV-infected infants initiating lopinavir/ritonavir-based versus nevirapine-based combination antiretroviral therapy.. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. Abstract
Treatment Outcome
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Species Specificity
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
RNA, Viral
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Reminder Systems
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Public Health Sciences Division
Slyker JA, Casper C, Tapia K, Richardson B, Bunts L, Huang M-L, Maleche-Obimbo E, Nduati R, John-Stewart G.  2013.  Clinical and Virologic Manifestations of Primary Epstein-Barr Virus (EBV) Infection in Kenyan Infants Born to HIV-Infected Women.. The Journal of infectious diseases. Abstract
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Slyker JA, Casper C, Tapia K, Richardson B, Bunts L, Huang M-L, Wamalwa D, Benki-Nugent S, John-Stewart G.  2014.  Accelerated suppression of primary EBV infection in HIV-infected infants initiating lopinavir/ritonavir-based versus nevirapine-based combination antiretroviral therapy.. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. Abstract
Marson KG, Tapia K, Kohler P, McGrath CJ, John-Stewart GC, Richardson BA, Njoroge JW, Kiarie JN, Sakr SR, Chung MH.  2013.  Male, Mobile, and Moneyed: Loss to Follow-Up vs. Transfer of Care in an Urban African Antiretroviral Treatment Clinic.. PloS one. 8(10):e78900. Abstract
Proportional Hazards Models
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Phylogeny
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
Patient Compliance
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
November 2013
Marson KG, Tapia K, Kohler P, McGrath CJ, John-Stewart GC, Richardson BA, Njoroge JW, Kiarie JN, Sakr SR, Chung MH.  2013.  Male, Mobile, and Moneyed: Loss to Follow-Up vs. Transfer of Care in an Urban African Antiretroviral Treatment Clinic.. PloS one. 8(10):e78900. Abstract
Memory
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
March 2014
Slyker JA, Casper C, Tapia K, Richardson B, Bunts L, Huang M-L, Wamalwa D, Benki-Nugent S, John-Stewart G.  2014.  Accelerated suppression of primary EBV infection in HIV-infected infants initiating lopinavir/ritonavir-based versus nevirapine-based combination antiretroviral therapy.. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. Abstract
Male
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Likelihood Functions
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
KENYA
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Humans
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract
Bull M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
Human Biology Division
Slyker JA, Chung MH, Lehman DA, Kiarie J, Kinuthia J, Holte S, Tapia K, Njiri F, Overbaugh J, John-Stewart G.  2012.  Incidence and correlates of HIV-1 RNA detection in the breast milk of women receiving HAART for the prevention of HIV-1 transmission.. PloS one. 7(1):e29777. Abstract
Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, Overbaugh J, Attwa M, John-Stewart GC.  2011.  A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes.. PLoS medicine. 8(3):e1000422. Abstract