Center-Authored Papers

Filters: Author is Rieder, Mark J  [Clear All Filters]
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Carlson CS, Eberle MA, Rieder MJ, Smith JD, Kruglyak L, Nickerson DA.  2003.  Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humans.. Nature genetics. 33(4):518-21. Abstract
Dean J, Emerson RO, Vignali M, Sherwood AM, Rieder MJ, Carlson CS, Robins HS.  2015.  Annotation of pseudogenic gene segments by massively parallel sequencing of rearranged lymphocyte receptor loci.. Genome medicine. 7(1):123. Abstract
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Wu D, Emerson RO, Sherwood AM, Loh ML, Angiolillo A, Howie B, Vogt J, Rieder MJ, Kirsch I, Carlson CS et al..  2014.  Detection of minimal residual disease in patients with B lymphoblastic leukemia by high-throughput sequencing of IGH.. Clinical cancer research : an official journal of the American Association for Cancer Research. Abstract
Carlson CS, Smith JD, Stanaway IB, Rieder MJ, Nickerson DA.  2006.  Direct detection of null alleles in SNP genotyping data.. Human molecular genetics. 15(12):1931-7. Abstract
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Howie BN, Carlson CS, Rieder MJ, Nickerson DA.  2006.  Efficient selection of tagging single-nucleotide polymorphisms in multiple populations.. Human genetics. 120(1):58-68. Abstract
Kumar A, White TA, MacKenzie AP, Clegg N, Lee C, Dumpit RF, Coleman I, Ng SB, Salipante SJ, Rieder MJ et al..  2011.  Exome sequencing identifies a spectrum of mutation frequencies in advanced and lethal prostate cancers.. Proceedings of the National Academy of Sciences of the United States of America. 108(41):17087-92. Abstract
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Carlson CS, Thomas DJ, Eberle MA, Swanson JE, Livingston RJ, Rieder MJ, Nickerson DA.  2005.  Genomic regions exhibiting positive selection identified from dense genotype data.. Genome research. 15(11):1553-65. Abstract
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Howie B, Sherwood AM, Berkebile AD, Berka J, Emerson RO, Williamson DW, Kirsch I, Vignali M, Rieder MJ, Carlson CS et al..  2015.  High-throughput pairing of T cell receptor α and β sequences.. Science translational medicine. 7(301):301ra131. Abstract
Emerson RO, Sherwood AM, Rieder MJ, Guenthoer J, Williamson DW, Carlson CS, Drescher CW, Tewari M, Bielas JH, Robins HS.  2013.  High-throughput sequencing of T cell receptors reveals a homogeneous repertoire of tumor-infiltrating lymphocytes in ovarian cancer.. The Journal of pathology. Abstract
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Fohner A, Muzquiz LI, Austin MA, Gaedigk A, Gordon A, Thornton T, Rieder MJ, Pershouse MA, Putnam EA, Howlett K et al..  2013.  Pharmacogenetics in American Indian populations: analysis of CYP2D6, CYP3A4, CYP3A5, and CYP2C9 in the Confederated Salish and Kootenai Tribes.. Pharmacogenetics and genomics. 23(8):403-414. Abstract
Reiner AP, Wurfel MM, Lange LA, Carlson CS, Nord AS, Carty CL, Rieder MJ, Desmarais C, Jenny NS, Iribarren C et al..  2008.  Polymorphisms of the IL1-receptor antagonist gene (IL1RN) are associated with multiple markers of systemic inflammation.. Arteriosclerosis, thrombosis, and vascular biology. 28(7):1407-12. Abstract
Q
Gordon AS, Tabor HK, Johnson AD, Snively BM, Assimes TL, Auer PL, Ioannidis JPA, Peters U, Robinson JG, Sucheston LE et al..  2013.  Quantifying rare, deleterious variation in 12 human cytochrome P450 drug-metabolism genes in a large-scale exome dataset.. Human molecular genetics. Abstract
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O'Connor TD, Fu W, Mychaleckyj JC, Logsdon B, Auer P, Carlson CS, Leal SM, Smith JD, Rieder MJ, Bamshad MJ et al..  2015.  Rare variation facilitates inferences of fine-scale population structure in humans.. Molecular biology and evolution. 32(3):653-60. Abstract
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Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA.  2004.  Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium.. American journal of human genetics. 74(1):106-20. Abstract
Reiner AP, Carlson CS, Thyagarajan B, Rieder MJ, Polak JF, Siscovick DS, Nickerson DA, Jacobs DR, Gross MD.  2008.  Soluble P-selectin, SELP polymorphisms, and atherosclerotic risk in European-American and African-African young adults: the Coronary Artery Risk Development in Young Adults (CARDIA) Study.. Arteriosclerosis, thrombosis, and vascular biology. 28(8):1549-55. Abstract
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Carlson CS, Heagerty PJ, Nord AS, Pritchard DK, Ranchalis J, Boguch JM, Duan H, Hatsukami TS, Schwartz SM, Rieder MJ et al..  2007.  TagSNP evaluation for the association of 42 inflammation loci and vascular disease: evidence of IL6, FGB, ALOX5, NFKBIA, and IL4R loci effects.. Human genetics. 121(1):65-75. Abstract
U
Carlson CS, Emerson RO, Sherwood AM, Desmarais C, Chung M-W, Parsons JM, Steen MS, LaMadrid-Herrmannsfeldt MA, Williamson DW, Livingston RJ et al..  2013.  Using synthetic templates to design an unbiased multiplex PCR assay.. Nature communications. 4:2680. Abstract
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Lange LA, Hu Y, Zhang H, Xue C, Schmidt EM, Tang Z-Z, Bizon C, Lange EM, Smith JD, Turner EH et al..  2014.  Whole-Exome Sequencing Identifies Rare and Low-Frequency Coding Variants Associated with LDL Cholesterol.. American journal of human genetics. 94(2):233-45. Abstract