Center-Authored Papers

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Park H, Bradley P, Greisen P, Liu Y, Mulligan VK, Kim DE, Baker D, DiMaio F.  2016.  Simultaneous Optimization of Biomolecular Energy Functions on Features from Small Molecules and Macromolecules.. Journal of chemical theory and computation. 12(12):6201-6212. Abstract
Kim DE, Blum B, Bradley P, Baker D.  2009.  Sampling bottlenecks in de novo protein structure prediction.. Journal of molecular biology. 393(1):249-60. Abstract
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Leaver-Fay A, Tyka M, Lewis SM, Lange OF, Thompson J, Jacak R, Kaufman K, Renfrew DP, Smith CA, Sheffler W et al..  2011.  ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules.. Methods in enzymology. 487:545-74. Abstract