Genomics Data Analysis

ABI Analysis

Information about analysis of sequencing, genotyping or PCR data generated by the  ABI technology are available at the the Genomics IT web site.

Recommended software for sequencing, genotyping and PCR analysis include GeneMapper, Peak Scanner, Primer Express, Sequence Detection Systems 2.3, Sequence Scanner Software, BioEdit, ClustalX, DnaSP, Geopspiza Finch TV, LALNVIEW, Sequencher, Oligo.

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Agilent Array Analysis

Information on processing data from Agilent arrays, links to tools including Feature Extraction Software, statistical analysis, gene ontology and pathway tools. This information is available from the Genomics IT web site.

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Illumina BeadChip Analysis

Information about available tools for collection, management and analysis of data obtained using the Illumina BeadChip platform are available from the Genomics IT web site.

Recommended software includes GenomeStudio.

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Illumina HiSeq 2500 analysis

Information on tools and processing data from the Illumina HiSeq 2500 is available from the Genomics analysis web site.

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